Job description

Bioinformatics Analyst
Hybrid Position. Cambridge, MA
2-3 days onsite

6+ Months
Multi-omics Bioinformatics Analyst

We are seeking a Bioinformatics Analyst to assist in multi-omics data analysis and setup network biology pipelines for supporting company target discovery programs and indication prioritization efforts. The role involves analyzing large collections of bulk and single cell transcriptomic data, performing differential expression analysis and meta-analysis and interpret results using gene set enrichment analysis, network biology approaches and other relevant post-processing method, including machine learning based methods. It will also involve multi-omics data analysis (proteomics, epigenetics, genetic) and collaborating with a diverse team to integrate multi-omics evidence with other workstreams.

Scope :

• Review, format and ingest relevant differential expression results internally and publicly available
• Automate and improve transcriptomic analysis pipeline (differential expression meta-analysis, gene set enrichment…)
• Prototype innovative network biology and AI/ML methods for multi-omics analysis and make them production ready.
• Write and automate Rmarkdown or Rshiny reports
• Coordinate with the project team to integrate multi-omics evidence with other evidences workstreams

Skills :

• Experience with post-processing of transcriptomic differential expression results (GSEA, GSVA, meta-analysis…)
• Experience with network biology or AI/ML methods for bulk and pseudo-bulk transcriptomic and multi-omics (WGCNA, OmicsFold, autoencoders, etc).
• Good R programming skills
• HPC and cloud computing environments (AWS, GCP)
• Some experience in human genetic is preferred, e.g. GWAS summary statistics postprocessing, mendelian randomization, colocalization, polygenic scores..
• Very good communication and collaboration skills
• Minimum Education: Masters Degree

TechData is proud to be an equal opportunity workplace and is an affirmative action employer. We are committed to equal employment opportunity regardless of race, color, ancestry, religion, sex, national origin, sexual orientation, age, citizenship, marital status, disability, gender identity or Veteran status.

Job Types: Contract, Temporary

Pay: $69.89 per hour

Benefits:

• Dental insurance
• Health insurance
• Paid time off

Schedule:

• 8 hour shift
• Day shift
• Monday to Friday

Application Question(s):

• What hourly rate are you seeking on a W2?
• What City and State do you currently reside in?

Education:

• Master's (Required)

Experience:

• GSEA, GSVA, meta-analysis: 1 year (Preferred)
• WGCNA, OmicsFold, autoencoders, etc: 1 year (Preferred)
• R programming: 1 year (Preferred)
• HPC and cloud computing environments (AWS, GCP): 1 year (Preferred)

Work Location: Hybrid remote in Cambridge, MA 02141

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